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Does anyone have experience opening hdf files in R (Windows OS)?

I can not work with hdf files in R. I believe that the R package hdf5will be what I need to work with these files, but it is difficult for me to install it. I get the following warning:

> install.packages("hdf5")
Installing package(s) into ‘C:/Users/ME/Documents/R/win-library/2.15’
(as ‘lib’ is unspecified)
--- Please select a CRAN mirror for use in this session ---

   package ‘hdf5’ is available as a source package but not as a binary

    Warning message:
package ‘hdf5’ is not available (for R version 2.15.2)

Does anyone have experience setting up a version of the Windows operating system for reading and working with hdf files? An example hdf file that I hope to work with can be found here .

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2 answers

The Bioconductor rhdf5 package is available on all platforms and has no system dependencies.

source("http://bioconductor.org/biocLite.R")
biocLite("rhdf5")

and then every session

library("rhdf5")
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. . Rtools.

http://hdf.ncsa.uiuc.edu. Windows 1.4.3.

zip - (, c:\temp;   ).

1) :

  • \ src\hdf5, .

  • hdf5dll.dll \ 5-143-win\c\release\dll \ SRC\hdf5\SRC

  • \5-143-win\c\release\ \ src\hdf5\src\include ( )

  • , , Rcmd % R_HOME%\src\hdf5

  • dir\library\hdf5 Windows

2) hdf5:

, hdf5dll.dll ... : dll, , , R!

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