I use knit()and markdownToHTML()for automatic reporting.
The problem is that I do not display graphics when using these commands. However, when I use the RStudio button Knit HTML, graphics are generated. When I use my own knit / markdown function, it unexpectedly displays a graph. When I switch to another document and insert it, the old plot will appear.
Example:
```{r figA, result='asis', echo=TRUE, dpi=300, out.width="600px",
fig=TRUE, fig.align='center', fig.path="figure/"}
plot(1:10)
```
Using commands:
knit(rmd, md, quiet=TRUE)
markdownToHTML(md, html, stylesheet=style)
So, I think there are two questions, depending on how you want to approach it:
- What magic happens in Rstudio
Knit HTML? - How can I create / enable without depending on the RStudio button
Knit HTML?